Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | -MASVLSY-----ESLVHAV-------AGAVGSVTAMTVFFPLDTARLRLQVDEKRKSKTTHMVLLEIIKEEGLLAPYRGWFPVISSLCCSNFVYFYTFN--SLKALWVKGQHSTTGKDLVVGFVAGVVNVLLTTPLWVVNTRLKLQGAKFRNEDIVPTNYKGIIDAFHQIIRDEGISALWNG------TFPSLLLVFNPAIQFMFYEGLKRQLLKKRMK-------LSSLDVFIIGAVAK--AIATTVTYPLQTVQSILRFGRHRLNPENRTLGSLRNILYLLHQRVRR----FGIMGLYKGLEAKLLQTVLT-------------AALMFLVYEKLTA-------------------------------ATFTVMGLKRAHQH |
4L8T Chain:A ((64-447)) | EYLGMLQYKREDEAKLIQNLILDLKPRGVVVNMIPGLPAHILFMCVRYADSLNDANMLKSLMNSTINGIKQ--VVKEHLEDFEMLSFWLSNTCHFLNCLKQYSGEEEFMKHNSPQQNKNCLNNF--------------------DLSEYRQILSDVAIRIYHQFIIIMEKNIQPIIVPGMLEYESLQGYTMTSVLQQLSYFYTTMCQNGLDPELVRQAVKQLFFLIGAVTLNSLFLRKDMCSCRKGMQIRCNISYLEEWLKDKNLQNSLAKETLEPLSQAAWLLQVKKTTDSDAKEIYERCTSLSAVQIIKILNSYTPIDDFEKRVTPSFVRKVQALLNSREDSSQLMLDTKYLFQVTFPFTPSPHALEMIQIPSSFKLGFLNRL |
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General information:
TITO was launched using:
| RESULT:
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Template: 4L8T.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -184917 for 1971 contacts (-93.8/contact) +
2D Compatibility (PS) -28866 + (NN) -771 + (LL) 1872
1D Compatibility (HY) -16800 + (ID) 2050
Total energy: -231532.0 ( -117.47 by residue)
QMean score : 0.302
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