Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGFEELLEQVGGFGPFQLRNVALLALPRVLLPLHFLLPIFLAAVPAHRCALPGAPANFSHQDVWLEAHLPREPDGTLSSCLRFAYPQALPNTTLGEERQSRGELEDEPATVPCSQGWEYDHSEFSSTIATESQWDLVCEQKGLNRAASTFFFAGVLVGAVAFGYLSDRFGRRRLLLVA---YVSTLVLGLASAASVS-YVMFAITRTLTGSALAG----FTIIVMPLELEWLDVEHRTVA-GVLSSTFWTGGVMLLALVGYLIR--DWRWLLLAVTLPCAPGILSLWWVPES-ARWLLTQGHVKEAHRYLLHCARLNGRPVCEDSFSQEAVSKVAAGERVVRRPSYLDLFRTPRLRHISLCCVVVWFGVNFSYYGLSLDVSG-L---GLNV---YQTQLLFGAVELPSKLLVYLSVRYAGRRLTQAGTLLGTALAFGTRLLVSSDMKSWSTVLAVMGKAFSEAAFTTAYLFTSELYPTVLRQTGMGLT-ALVGRLGGSLAPLAA-LLDGV-WLSLPKLTYGGIALLAAGTALLLPETRQAQLPETIQDVERKSAPTSLQEEEMPMKQVQN |
| 2CFQ Chain:A ((42-391)) | --------------------------------------------------------------------------------------------------------------------------------------------KSDTGIIFAAISLFSLLFQPLFGLLSDKLGLRKYLLWIITGMLVMFAPFFIFIFGPLLQYNILVGSIVGGIYLGFCFNAGAPAVEAFIEKVSR--RSNFEFGRAR-MFGCVGWALGASIVGIMFTINNQFVFWLGSGCALILAVLLFFAKTDAPSS------ATVANA-------VGAN------------------HSAFSLKLALELFRQPKLWFLSLYVIGVSCTYDVFDQQFANFFTSFFATGEQGTRVFGYVTTMGELLNASIMFFAPLIINRIGGKNALLLAGTIMSVRIIGSSFAT-S-ALEVVILKTLHMFEVPFLLVGCFKYITSQFEVRFSATIYLVCFCFFKQLAMIFMSVLAGNMYESIGFQGAYLVLGLVALGFTLISVFTLSGPGPLSLLRRQVNEVA------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2CFQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -169283 for 2416 contacts (-70.1/contact) +
2D Compatibility (PS) -32522 + (NN) 2794 + (LL) 13096
1D Compatibility (HY) -9200 + (ID) 2000
Total energy: -197115.0 ( -81.59 by residue)
QMean score : 0.068
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