Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAFSKLLEQAGGVGLFQTLQVLTFILPCLMIPSQMLLENFSAAIPGHRCWTHMLDNGSAVSTNMTPKALLTISIPPGPNQGPHQCRRFRQPQWQLLDPNATATSWSEADTEPCVDGWVYDRSVFTSTIVAKWDLVCSSQGLKPLSQSIFMSGILVGSFIWGLLSYRFGRKPMLSWCCLQLAVAGTSTIFAPTFVIYCGLRFVAAFGMAGIFLSSLTLMVEWTTTSRRAVTMTVVGCAFSAGQAALGGLAFALRDWRTLQLAASVPFFAISLISWWLPESARWLIIKGKPDQALQELRKVARINGHKEAKNLTIEVLMSSVKEEVASAKEPRSVLDLFCVPVLRWRSCAMLVVNFSLLISYYGLVFDLQSLGRDIFLLQALFGAVDFLGRATTALLLSFLGRRTIQAGSQAMAGLAILANMLVPQDLQTLRVVFAVLGKGCFGISLTCLTIYKAELFPTPVRMTADGILHTVGRLGAMMGPLILMSRQALPLLPPLLYGVISIASSLVVLFFLPETQGLPLPDTIQDLESQKSTAAQGNRQEAVTVESTSL |
3JA7 Chain:A ((1-447)) | NWISELIDTYRN--LMNNYE-----------VDNAVSEIVSDAIV--------YEDDTEV-----------VALNLDKSKFSPKIKNMMLDEFSDVLNHL---SFQRKGSDHFRRWYVDSRIFFHKIIDPKR----PKEGIKELRRL-DPRQVQYVYFIYDTAHESYA-------CDGRMYEAGTKIKIPKAAVVYAH--------------------------------SGLVDCC---GKNIIGYLHRAVKPANQLKLLEDAVVIYRITRA---PDRRVWYVDTGNMPARKAAEHMQHVMNTMKN------RVVYDASTGKIKNQQHNMSMTEDYWLQRRDGKA--------VTEVDTLPGADNTGNMEDIRWFRQALYMA---LRVPLSRIPQDQQGGVMFDSGTSITRDELTFAKFIRELQHKFEEVFLDPLKTNLLLKGIITEDEWNDEINNIKIEFHRD------SYFAELKEAEILERRINMLTMAEPFIGK-----------YISHRTAMKDILQMTDEEIEQEAKQIEEESKEARFQD--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3JA7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -151583 for 2642 contacts (-57.4/contact) +
2D Compatibility (PS) -44835 + (NN) -10544 + (LL) 11816
1D Compatibility (HY) -10400 + (ID) 2900
Total energy: -208446.0 ( -78.90 by residue)
QMean score : 0.084
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