Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAFSELLDLVGGLGRFQVLQTMALMVSIMWLCTQSMLENFSAAVPSHRCWAPLLDNSTAQASILGSLSPEALLAISIPPGPNQRPHQCRRFRQPQWQLLDPNATATSWSEADTEPCVDGWVYDRSIFTSTIVAKWNLVCDSHALKPMAQSIYLAGILVGAAACGPASDRFGRRLVLTWSYLQMAVMGTAAAFAPAFPVYCLFRFLLAFAVAGVMMNTGTLLMEWTAARARPLV--MTLNSLGFSFGHGLTAAVAYGVRDWT------LLQLVVSVP---FFLCFLYSWWLAESARWLLTTGRLDWGLQELWRVAAINGK-GAVQDTLTP-EVLLSAMREELSMGQPPASLGTLLRMPGLRFRTCISTLCWFAFGFTFFGLALDLQALGSNIFLLQMFIGVVDIPAKMGALLLLSHLGRRPTLAASLLLAGLCILANTLVPHEMGALRSALAVLGLGGVGAAFTCITIYSSELFPTVLRMTAVGLGQMAARGGAILGPLVRLLGVHGPWLPLLVYGTVPVLSGLAALLLPETQSLPLPDTIQDVQNQAVKKATHGTLGNSVLKSTQF |
| 2IMJ Chain:A ((5-162)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AQVRPPLPPFTRESAIEKIRLAEDGWNSRD------PERVSLAYTLDTQWRNRAEFAHNREEAKAFLTRKWAKELDYRLIKELWAFTDNRIAVRYAYEWH-DDSGNWFRSYGNENWEFDE-------QGLMARRFACINDMPIKAQERKFHWPLGRRPDDHPGLSELGLEHH------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2IMJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -91284 for 992 contacts (-92.0/contact) +
2D Compatibility (PS) -15479 + (NN) -1888 + (LL) 30932
1D Compatibility (HY) 0 + (ID) 1250
Total energy: -78969.0 ( -79.61 by residue)
QMean score : 0.201
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