Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MQGARAPRDQGRSPGRMSALGRSSVILLTYVLAATELTCLFMQFSIVPYLSRKLGLDSIAFGYLQTTFGVLQLLGGPVFGRFADQRGARAALTLSFLAALALYLLLAAASSPALPGVYLLFASRL-PGALMHTLPAAQMVITDLSAPEERPAALGRLGLCFGVGVILGSLLGGTLVSAYGIQCPAILAALATLLGAVLSFTCIPASTKGAKTDAQAPLPGGPRASVFDLKAIASLLRLPDVPRIFLVKVASNCPTGLFMVMFSIISMDFFQLEAAQAGYLMSFFGLLQMVTQGLVIGQLSSHFSEEVLLRASVLVFIVVGLAMAWMSSVFHFCLLVPGLVFSLCTLNVVTDSMLIKAVSTSDTGTMLGLCASVQPLLRTLGPTVGGLLYRSFGVPVFGHVQVAINTLVLLVLWRKPMPQRKDKVR |
1MZE Chain:A ((15-351)) | -SGEPREEAGALGPAWDESQLRSYSFPTRPI-------------------PRLSQSDPRAEELIEN--------EEPVVLTDTNLVYPALKWDLEYLQENIGNGDFSVYSASTHKFLYYDEKKMANFQNFKPRSNREEMKFHEFVEKLQDIQQRGGEERLYLQQTLNDTVGRKIVMDFLGFNWNWINKQQGKRGWGQLTSNLLLIGMEGNVTPAHY-----------------------DEQQNFFAQIKGY---KRCILFPPDQFECLYPYPVHHPCDRQSQVDFDNPDYERF--PNFQNVVGYETVVGPGDVLYIP--------MYWWHHIESLLNGGITITVNFWYKGAPTPIEYPLKAHQKVAIMRNIEKMLGEALG-----------------------NPQEVGPLLNTMIKGRYN--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1MZE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -233018 for 2573 contacts (-90.6/contact) +
2D Compatibility (PS) -34542 + (NN) 5612 + (LL) 7408
1D Compatibility (HY) 1200 + (ID) 1650
Total energy: -254990.0 ( -99.10 by residue)
QMean score : 0.178
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