Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --------MDFLMSGLAACGACVFT-NPLEVVKTRMQLQGELQAPGTYQRHYRNVFHAFITIGKVDGLAALQKGLAPALLYQFLMNGIRLGTYGLAEAGGYLHTAEGTHSPARSAAAGAMAGVMGAYLGSPIYMVKTHLQAQAASEIAVGHQYKHQGMFQALTEIGQKHGLVGLWRGALGGLPRVIVGSSTQLCTFSSTKDLLSQWEIFPPQSWKLALVAAMMSGIAVVLAMAPFDVACTRLYNQPTDAQGKGLMYRGILDALLQTARTEGIFGMYKGIGASYFRLGPHTILSLFFWDQLRSLYYTDTK |
| 2CVH Chain:A ((1-220)) | MLSTGTKSLDSLLGGGFAPGVLTQVYGPYASGKTTLALQTGLLSGK--------------KVAYVDT----EGGFSPERLVQMAETR----GLNPEEALSRFILFTPSDFKEQRRVIGSLKKTVDS--NFALVVVDSITAHYRAEENRSGLIAELSRQLQVLLWIARKHNIP------------VIVINQVHFDSRTEMTKPVAEQ----------------------TLGYRCKDIL--RLDKLPKPGLRVAVLER-------HRFRPEGL--------MAYFRITERGIEDVE-------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2CVH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -115125 for 1672 contacts (-68.9/contact) +
2D Compatibility (PS) -22361 + (NN) -4906 + (LL) 6940
1D Compatibility (HY) -5600 + (ID) 2250
Total energy: -143302.0 ( -85.71 by residue)
QMean score : 0.231
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