Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --------------MRPQDSTGVAELQEPGLPLTDDAPPGATEEPAAAEAA-GAPD--RGRCWLCLSSPCCSRTEPEAKKKAPCPGLGLFYTLLSAFLFSVGSLFVKKVQDVHAV-------------EISAFRCVFQMLVVIPCLIYRKTGFIGPKGQRIFLILRGV----------------LGSTAMMLIYYAYQTMSLA---DATVITFSSPVFTS-IFAWICLKEKY---------SPWDALFTVFTITGVILIVRPPFLFGSDTSGMEESYSGHLKG-TFAAIGSAVFAASTLVILRKMGKSVDYFLSIWYYVVLGLVESVI--------------------------ILSV----LGEWSLPYCGLDRLFLIFIGLFGLGGQIFITKALQIEKAGPVAIMKTMDVVFAFIFQIIFFNN----VPTWWTVGGAL------CVVASNVGAAIRKWYQSSK--- |
| 4L9P Chain:B ((68-519)) | VHPGIPALFREPPLIHDLLSTETTELQSETVNKCLPLLKGIHNSQKGPFNKYGIPALQRKDHLEYLYDSLEDYPASFVALDASRPWMVYWALAGLCLLGEDVTRFRERVISTFTAAQNSTGGIGGGHGQMSHVASSYAAVLSI-AMVGGEEAFKLIDRKAMWKWLGKLKQPDGGFTVCEGGEEDVRGAYCAMVVHALLDLPLALPPEAEARQNGLETFTDGLPEYLSRCQTYEGGISGSPGSEAHGAYAFCALACLCLLGRPEVVVPRYMN--IATLLPWLSARQYAPEGG--FSGRT-------NKLVDGCYSHWVGNCWPLVQAALDGTQPLAGPKRSSVGNLYSREGLTRYILSCCQCKLGGLRDKPGKHPDSYHTCYALTGLSTVQYYHYCTD----SSVSSKDDFSSAFSWKHDPNFASDGQGSDIGVFTENDRLVPFHPIFVIPHKSAEDIRVWFENQSFDL |
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General information:
TITO was launched using:
| RESULT:
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Template: 4L9P.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -327222 for 2717 contacts (-120.4/contact) +
2D Compatibility (PS) -34782 + (NN) 654 + (LL) 1868
1D Compatibility (HY) -11600 + (ID) 2950
Total energy: -374032.0 ( -137.66 by residue)
QMean score : 0.206
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