Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MVGYDPKPDGRNNTKFQVAVA---------GSVSGLVTRALISPFDVIK-----IRFQLQHERLSRSDPSAKYHGILQASRQILQEEGPTAFWKGHVPAQILSIGYGAVQFLSFEMLTELVHRGSVYDAREFSVHFVCGGLAACMATLTVHPVDVLRTRFAAQGEPKVYNTLRHAVGTMYRSEGPQVFYKGLAPTLIAIFPYAGLQFSCYSSLKHLYKWAIPAEGKKNENLQNLLCGSGAGVISKTLTYPLDLFKKRLQVGGFEHARAAFGQVRRYKGLMDCAKQVLQKEGALGFFKGLSPSLLKAALSTGFMFFSYEFFCNVFHCMNRTASQR |
4QYX Chain:A ((2-236)) | -----------APKKVLLALTSYNDVFYSDGAKTGVFVVEALHPFNTFRKEGFEVDFVSETGKFGWDEHSLAKDFLNGQDETDFKNKDS-----------------------DFNKTLAKIKTPKEVNADDYQIFFASAGHGTLFDYPKAKDLQDIASEIYANG--GVVAAVCHGPAIFDGLTDKKTGRPLIEGKSITGFTDVGETIL---------GVDSILKAKNLATVEDVAKKYGA-----KYLAPVGPWDDYSITDG-------------------------------RLVTGVNPASAHSTAVRSIVALK------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4QYX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -132535 for 2014 contacts (-65.8/contact) +
2D Compatibility (PS) -23550 + (NN) -5045 + (LL) 6792
1D Compatibility (HY) -2800 + (ID) 1300
Total energy: -158438.0 ( -78.67 by residue)
QMean score : 0.274
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