Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEHSEGAPGDPAGTVVPQELLEEMLWFFRVEDASPWNHSILALAAVVVIISMVLLGRSIQASRKEKMQPPEKETPEVLHLDEAKDHNSLNNLR------------ETLLSEKPNLAQVELELKERDVLSVFLPDVPETES
5C6G Chain:B ((3-130))
-----TFPGE--DTRIPKRISEAL-------SHQPLNHLVPKRELSRLLSKPVQISVQLESEDAFEEVPEELWQYPHPIDLDPLRLEQPLRFRRPRGARLDYREDSSEIADLPGMGQLARACLSGTQLVDSAAIVESIES
General information:
TITO was launched using:
RESULT:
Template:
5C6G.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 16152 for 433 contacts (37.3/contact) +
2D Compatibility (PS) -12071 + (NN) -9122 + (LL) 1428
1D Compatibility (HY) 1200 + (ID) 900
Total energy: -3313.0 ( -7.65 by residue)
QMean score : 0.206
(partial model without unconserved sides chains):
PDB file :
Tito_5C6G.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-5C6G-query.scw
PDB file :
Tito_Scwrl_5C6G.pdb
: