Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEALGDLEGPRAPGGDDPAGSAGETPGWLSREQVFVLISAASVNLGSMMCYSILGPFFPKEAEKKGASNTIIGMIFGCFALFELLASLVFGNYLVHIGAKFMFVAGMFVSGGVTILFGVLDRVPDGPVFIAMCFLVRVMDAVSFAAAMTASSSILAKAF--PNNVATVLGSLETFSGLGLILGPPVGGFLYQSFGYEVPFIVLGCVVLLMVPLNMYILPNYESDPGEHSFWKLIALPKVGLIAFVINSLSSCFGFLDPTLSLFVLEKFNLPAGYVGLVFLGMALSYAISSPLFGLLSDKRPP--LRKWLLVFGNLITAG-CYMLLGPVPILHIKSQLWLLVLILVVSGLSAGMSIIPTFPEILSCAHENGFEEGLSTLGLVSGLFSAMWSIGAFMGPTLGGFLYEKIGFEWAAAIQGLWALISGLAMGL-FYLLEYSRRKRSKS-----------QNILSTEEERTTLLPNET-------- |
| 4R33 Chain:A ((35-418)) | ----GDFVLPELEDVRAEAATVDTRAVLALAEGEEPAESRAAVALALWEDRSIGTAELQAAAEARCGA-----------------------------------------------------RRPRLHTFVPLY-TTNYCDSECKMCSMRKGNHRLDRKFSGRKEITEQLEILYHHEG--------VRGVGFLTGEYEDKHTRLASAFRIGWAIRTALDLGFE------------------RVYFNIGSME--------QDEIDVLGEWIGREDPVTMCVFQESYDRETYRRFMGKTSVGVPKADFDRRVVSFDRWLDAGYRYVNPGVLVGLHDDLSAELVSLVAHGDHLRSRGATA-----DLSVPRMRPAMKSRDTTRVGDDDYLRLMSVVAFTCPEQRLVLTTREPQEFQDVALGLAGVISPGSPDVAPYRAGCEARNDEKSSQFLVADLRRPRHILGRIEASGTPVDHFVNPAGEASR |
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General information:
TITO was launched using:
| RESULT:
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Template: 4R33.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -324688 for 3013 contacts (-107.8/contact) +
2D Compatibility (PS) -36820 + (NN) -1083 + (LL) 6116
1D Compatibility (HY) -800 + (ID) 3450
Total energy: -360725.0 ( -119.72 by residue)
QMean score : 0.295
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