Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ------MHTTESKNEHLEDENF------QTSTTPQSLIDPNNTAQEETKTVLSDTEEIKPQTKKETY---ISCP------LRGVLNVIITNGVILFVIWCMTWSILGSEALPGGNLFGLFIIFYSAIIGGKILQLIRIPLVPPLPPLLGMLLAGFTIRNVPF-----INEHVHVPNTWSSIL-RSIALTII--LIRAGLGLDPQALRHLKV---------------------------------VCFRLAVGPCLMEASAAAVFSHFIMKFPWQWAFL--LGFVLGAVSPAVVVPYMM---VLQENGYGVEEGIPTLLMAASSM--DDILAITGFN---------TCLSIVFS---------SGGILNNAIASIRNVCISLLAG----IVLGFFVRY------------FPSEDQKKLTLKRGFLVLTMCVSAVLGSQRIGLHGSG-GLCTLVLSFIAGTKWSQEKMKVQKIITTVWDIFQPLLFG---LVGAEVSVSSLESNIVGISVATLS----------LALCVRILTTYLLMCFAGFSFKEKIFIALAWMPKATVQAVLGPLALETARVSAPHLEPYAKDVMTVAFLAILITAPNGAL--LMGILGPKMLTRHYDPSKIKLQLSTLEHH------- |
| 3VMN Chain:A ((5-637)) | NGNMINLTTDKAVYQAGEAVHLNLTLNNTTSLAQNITATAEVYSLENKLKTLQYTKYLLPNESYTTQKGEFVIPANSLANNRGYLLKVNISDSQNNILEQGNRAIAVEDDWRTFPRYAAIGGSQKD--NNSVLTKNLPDYYRELEQMKNMNINSYFFYDVYKSATNPFPNVPKFDQSWNWWSHSQVETDAVKALVNRVHQTGAVAMLYNMILAQNANETAVLPDTEYIYNYETGGYGQNGQVMTYSIDDKPLQYYYNPLSKSWQNYISNAMAQAMKNGGFDGWQGDTIGDNRVLSHNQKDSRDIAHSFMLSDVYAEFLNKMKEKLPQYYLTLNDVNGENISKLANSKQDVIYNELWPFGTSALGNRPQESYGDLKARVDQVRQATGKSLIVGAYMEEPKFDDNRIPLNGAARDVLASATYQTDAVLLTTAAIAAAGGYHMSLAALANPNDGGGVGVLETAYYPTQSLKVSKELNRKNYHYQQFITAYENLLRDKVENDSAEPQTFTANGRQLSQDALGINGDQVWTYAKKGNDFRTIQLLNLMG-----ITSDWKNEDGYENNKTPDEQTNLLVTYPLTGVSMAEADRIA-KQVYLTSPDDWLQSSMISLATQVKTNENGDPVLYIQVPRLTLWDMIYILE |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3VMN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -402440 for 4030 contacts (-99.9/contact) +
2D Compatibility (PS) -52257 + (NN) 13281 + (LL) 1108
1D Compatibility (HY) -1200 + (ID) 2900
Total energy: -444408.0 ( -110.27 by residue)
QMean score : 0.108
|
|
|