Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MYMKKLKFITLTLAIIITLPMLQSCLDDNDHQSRSLVI-STINQISEDSKEFYFTLDNGKTMFPSNSQAWGGEKFENGQRAFVIFNELEQPVNGYDYNIQVRDITKVLTKEIVTMDDEENTEEKIGDDKINATYMWISKDKKYLTIEFQYYSTHSEDKKHFLNLVINNKEADSAAENEDNTDDEYINLEFRHNSERDSPDHLGEGYVSFKLDKIEEQ-IEGKKGLNIRVRTLYDGIKNYKVQFP |
| 2XVO Chain:A ((9-192)) | -----SQQVEWVFIPVIKDVTYEFKVDNNDNITELYVNGNKLGPASSLEMDFYFDVD------VSNNQV---RKFNN---VFVLFGVIATKDSN--------KIKMQLTLNPC--------------DFVRG-FVFPSQDPSQLNNIFASNNKVSVSEKAF---AILNRKKEGAVSS-------TINVYITQNTYTGNT----------KIEKIQQNTIIIEKNTGIVFKIPNDMLNIFRYSTT |
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General information:
TITO was launched using:
| RESULT:
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Template: 2XVO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -12907 for 1397 contacts (-9.2/contact) +
2D Compatibility (PS) -19084 + (NN) 464 + (LL) 2428
1D Compatibility (HY) -8000 + (ID) 2150
Total energy: -39249.0 ( -28.10 by residue)
QMean score : 0.174
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