Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKLKKILGLLGLALAAAFVLTACGQKNDKNTLTVGVMTMTDSDKERWDKIEELLKKENIKLKFKEFTDYSQPNKALKNGEIDINSFQHYNFLNNWNKENKGDLVTVAETYISPINLFSGTENGKAKYSSAKEIPNGGQIAIPNDATNESRALYVLQDAGLIKLNVSGDELATVKNIKSNPKNLDIKEVDASQTARNLASVDAAVVNNSYAVPAKIDF-KTSLYKEKVNEGSKQWINIIAAQKNWKKSKKAAAIKKLIKAYHTDAVKKVIKKTAKGVDE-PVW |
1XS5 Chain:A ((1-240)) | ---------------------------KDETVGVGVLSEP--HARLLEIAKEEVKKQHIELRIVEFTNYVALNEAVMRGDILMNFFQHVPHMQQFNQEHNGDLVSVGNVHVEPLALYS------RTYRHVSDFPAGAVIAIPNDSSNEARALRLLEAAGFIRMRAGSGLFATVEDVQQNVRNVVLQEVESALLPRVFDQVDGAVINGNYAIMAGLSARRDGLAVEP---DASAYANVLVVKR---GNEADARVQAVLRALCGGRVRTYLKERYKGGEVAPA- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1XS5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -36110 for 2001 contacts (-18.0/contact) +
2D Compatibility (PS) -24903 + (NN) -5359 + (LL) 2780
1D Compatibility (HY) -18800 + (ID) 3750
Total energy: -86142.0 ( -43.05 by residue)
QMean score : 0.417
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