Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRPVFILGIILLLVGCKQRDERVLMVDEQGSFAVGGTVLVDSLGHTFHGDHAYVFYQKPVGARKYPLVFAHGVGQFSKTWETTPDGREGFQNIFLRRRFCVYLVDQPRRGNAGRGTESVTISPAFDEEVWFNRFRVGIWPDYFEGVQFKRDKETLDQYFRQMTPTIGTTDFEVYSDAYAALFDKIG--PGVFITHSQGGPVGWNTLLK-TRNIKAIASYEPGGAVPFPEGQLPEEAKFITLSKKMEGIEVPMSVFMEYTK--------------------VPIVIYYGDNLPETDERPELYEWTRRLRLMKIWAKMLNDQ--------------------------GGDVTVIH------------------LPEVG---LHGNTHFPMSDLNNIEVADLLSEWLHTKALD |
| 1EK1 Chain:A ((226-544)) | -----------------------LPVPCNPND-VSHGYVTVKPGIRLH----FVEM-----GSGPALCLCHGFPESWFSWRYQ-------IPALAQAGFRVLAIDMKGYGDSSS------------------------------------------------PPEIEEYAMELLCKEMVTFLDKLGIPQAVFIGHDWAGVMVWNMALFYPERVRAVASLNTPFMPPDPDVSPMKVIRSIPVFNYQLYFQEPGVAEAELEKNMSRTFKSFFRASDETGFIAVHKATEIGGILVNTPEDPNLSKITTEEEIEFYIQQFKKTGFRGPLNWYRNTERNWKWSCKGLGRKILVPALMVTAEKDIVLRPEMSKNMEKWIPFLKRGHIEDCGHWTQIEK-PTEVNQILIKWLQTE--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1EK1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -75744 for 1905 contacts (-39.8/contact) +
2D Compatibility (PS) -26806 + (NN) -12201 + (LL) 5724
1D Compatibility (HY) -10400 + (ID) 2650
Total energy: -122077.0 ( -64.08 by residue)
QMean score : 0.164
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