Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEVKSLLMVMATLTIAGCSQNEMTEMNPDTNRTIGL-DVYTE--VQTRGTETTTSTLKANAGFGIFAYQTSSAGWNSEKGNTTPNFMYNEHATWTSDSWGYTNLRFWPIDDKKITFFAYAPYESKPEVGTDQKITLSGQNAKGAPTITFEVKTSNNWKDMIDLVTDCHTAIQDQTNESNKGTVQFK-FSHVLTQIANIKVKPDVN----LGTDTKIFVTGLKLDPGSTTLYNKAVYKFDNDTWEAISPD-ASYFSTEQDLSDFLNKTTTDQWGYNKSSINVSDDQNATALFSDTEALYFIPVNNKNGTTNAGDLKLKINYDIVTKVTDTSNLTSTITNKEVSLP--KNTFKKGTKHTYVLTIKMNAIKITVE-DNMEGWTDDSDSDINVEK |
| 3SY6 Chain:A ((8-279)) | ----------------------------SGEKTLAVVSASSDDRPSTRGII-----NDNTYALGVFRTTANT----------YA-PLYNVKHIYSGGEWGADDVIKVDY--RNASFFAYYPYHTATGNY----A-----GLAGGTTLTLQAQ---LFNAGEDICYGAGEASGGGPVSVYNPFVEFLNMKHAYARLRLTLTRGEKFDKTKKCNIQNI-----TFKSNNANFYLTRSLDIASTAGATGGSAVAAGYVHN------PN-------------VNIAT------GKSVTYEYMFPPQPLDGS-------KLTILVTVD---G---------VTRSCDISTLGSSLDSGKYYGVSLTFTDVGIILSSAVVTVNNF------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3SY6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -40361 for 1964 contacts (-20.6/contact) +
2D Compatibility (PS) -27932 + (NN) -7001 + (LL) 4916
1D Compatibility (HY) -7200 + (ID) 2000
Total energy: -79578.0 ( -40.52 by residue)
QMean score : 0.229
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