Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --------------DIAQTVNGSLTLTQQTNLSAPLVSSSTGEFGGSLAANRTFT----IRNTGAPTSIVFEKGPASGANP-AQSMSIRVWG----------NQFGGGSDTTRSTVFEVGDDTSHHFYSQRNKDGNIAFNINGTVMPININASGLMNVNGTATFGRSVTANGEFISKSANAFRAINGDYGFFIRNDASNTYFLLTAAGDQTGGFNGLRPLLINNQSGQITIGEGLIIAKGVTINSGGLTVNSRIRSQGTKTSDLYTRAPTSDTVGF-WSIDINDSATYNQFPGYFKMVEKTNEVTGLPYLERGEEVKSPGTLTQFGNTLDSLYQDWITYPTTPEART---TRWTRTWQKTKNSWSSFVQVFDGGNPPQPSDIGALPSDNATMGNLTIRDFLRIGNVRIVPDPVNKTVKFEWVE |
| 2XTS Chain:A ((2-390)) | GTPDPLITEIQPWASEFGEAVDAHPYGLPIHFESHVKRQYVEWLTESPVSSINFTPIHALEGTITPQGCAFERHHSGAIELSKQDYRLMINGLVEKPLVFTFEDLLRFPRTTTTAFCECAANGGMEWGGAQLEGCQYTQGMIHNMEYVGVPLSVLLAEAGVKPEGKWLYAEG---ADASSNGRSFP------MEKVMDDVMLAFFANGEALRKEHGYPARLV------VPGWEGNMWVKWVRR----LGIYDKAVESREETSKYTDLMPDGRARKWTWVMDAKSVITSPSPQVPIRHGKGPLVISGLAW-------SGNGRITRVDVSLDG-GKNWTTARITGQALPKALTRFHLDIDWDGSEMLLQSRAVDETGYVQPT----KDALRAIRGRNNVYHNNGIQTWWVKAD---GEVENVEIA |
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General information:
TITO was launched using:
| RESULT:
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Template: 2XTS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 2988 for 2849 contacts (1.0/contact) +
2D Compatibility (PS) -37545 + (NN) -14162 + (LL) 660
1D Compatibility (HY) -7200 + (ID) 2700
Total energy: -57959.0 ( -20.34 by residue)
QMean score : 0.176
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