Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKNSLYIISSLFFACVLFVYATATNFQNSTSARQVKTETYTNTVTNVPIDIRYNSDKYFISGFASEVSVVLTGANRLSLASEMQESTRKFKVTADLTDAGVGTIEVPLSIEDLPNG--LTAVA-TPQKITVKIGKKAQKDKVKIVPEIDPSQIDSRVQIENVMVSDKEVSITSDQETLDRIDKIIAVLPTSERITGNYSGSVPLQAIDRNGVVLPAVITPFDTIMKVTTKPVAPSSSTSNSSTSSSSETSSSTKATSSKTN |
1IB8 Chain:A ((1-164)) | --------------------------------------------------------------------------GSGVDAIATIVELVREVVEPV----IEAPFELVDIEYGKIGSDMILSIFVDKPEGITLNDTADLTEMISPVLDTIKPDPFPEQYFLEITSPGLER-PLKTKDAVAGAVG-KYIHVGLYQAIDKQKVFEGTLLAFEEDELTMEYMDKTRKKTVQIPYSLVSK-----ARLAVKLLE------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1IB8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -28586 for 996 contacts (-28.7/contact) +
2D Compatibility (PS) -17215 + (NN) -5061 + (LL) 6032
1D Compatibility (HY) -4800 + (ID) 750
Total energy: -50380.0 ( -50.58 by residue)
QMean score : 0.170
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