Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
GALTAQGASFFTAAPLSYNTGNSTISLDYRSPQLRVSGGALALTSPVFVYQTPFNTPMRLRNGTYNEYADAHIQMVRFGTTVLFNIDVTGETNATGTQTWELQFDGTLGSCLTGRMQVMGGTGEELDVTPTFILPTSDKSVYKQGFMPIVCSENGEFKQSTYCSYALTYRLGNF-YITLKSTTSGCKPIFQMSFMYESQIGIV
3ZPE Chain:A ((53-190))
GRATNGQFVTKTAKVLRYKFVRW---------------------DALLIIQFIDNIG-VMENPTFYRNKSIELRSADFLSPML---------------------NNTYIVPLNGGVRVESPT---IPVQLEVILE-NNSSFIQVGFVRLTVK-NGNPHMIIQCNPVP----GNIKMIKIKSV-----------MLFTCLIG--
General information:
TITO was launched using:
RESULT:
Template:
3ZPE.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -70480 for 955 contacts (-73.8/contact) +
2D Compatibility (PS) -14737 + (NN) -3189 + (LL) 4208
1D Compatibility (HY) -8800 + (ID) 1650
Total energy: -94648.0 ( -99.11 by residue)
QMean score : 0.117
(partial model without unconserved sides chains):
PDB file :
Tito_3ZPE.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3ZPE-query.scw
PDB file :
Tito_Scwrl_3ZPE.pdb
: