Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKNLLCLLALLLCTTVFAQPQQVVVGVSGNGYVTRQQDGARITQRGVTHWTNPKSIVSIYFYLHQPTTADLSLYAK----GHSEIKVSYGKKGF-K-VNLQSND----FTKVPVGSIDIRQAGYVRIDLQGVSKSGEGFGEIKQLIADNVTGKSNYVKDFSDYWGRRGPSVHLGYALPEGDTEWFYNEITVPKEGETMHSYYMAAGFGEGYFGMQYNSPTERRILFSVWSPFDTQNPKEIPDDQKIKLLRQGKDVHIGEFGNEGSGGQSYLKYPWKAGNTYKFLMQIRPDGNGNTTYTAYFYATDEKEWKLIASFLRPKTNTWYKRPHSFLENFSPEQGYLSREVFFGNQWARSKEGKWSRLTDATFTHDATASAQVRLDYQGGNTKDNRFYLKMGGFFNESVPMGTKFYCKPTGKEPEIDWEALKQL |
| 2VZP Chain:A ((31-127)) | ----------------------------------------------VNYDNVAGSSVEWTVTVPSAGTYDVVVRYANGTTTSRPLDFSVNGSISASGVAFGSTGTWPAWTTKTV-RVTLA-AGVNKIKAVATTA--NGGPNVDKITL----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2VZP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -66703 for 593 contacts (-112.5/contact) +
2D Compatibility (PS) -9321 + (NN) -1121 + (LL) 15988
1D Compatibility (HY) -3200 + (ID) 700
Total energy: -65057.0 ( -109.71 by residue)
QMean score : 0.101
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