Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MGPVAGNYVHDFTAN-GTSSSFYTIAGN-LSTSKGTATYNGKTLTQCLKMETATSISFTAPS--AGKLTLVFAEAAATAKVDGNKVTASNGIITVDLA-QGAHTITKADACNLFYMEYAAHHHHHH------------------------------------------------------------------------- |
1QHO Chain:A ((1-686)) | SSSASVKGDVIYQIIIDRFYDGDTTNNNPAKSYGLYDPTKSKWKMYWGGDLEGVRQKLPYLKQLGVTTIWLSPVLDNLDTLAGTDNTGYHGYWTRDFKQIEEHFGNWTTFDTLVNDAHQNGIKVIVDFVPNHSTPFKANDSTFAEGGALYNNGTYMGNYFDDATKGYFHHNGDISNWDDRYEAQWKNFTDPAGFSLADLSQENGTIAQYLTDAAVQLVAHGADGLRIDAVKHFNSGFSKSLADKLYQKKDIFLVGEWYGDDPGTANHLEKVRYANNSGVNVLDFDLNTVIRNVFGTFTQTMYDLNNMVNQTGNEYKYKENLITFIDNHDMSRFLSVNSNKANLHQALAFILTSRGTPSIYYGTEQYMAGGNDPYNRGMMPAFDTTTTAFKEVSTLAGLRRNNAAIQYGTTTQRWINNDVYIYERKFFNDVVLVAINRNTQSSYSISGLQTALPNGSYADYLSGLLGGNGISVSNGSVASFTLAPGAVSVWQYSTSASAPQIGSVAPNMGIPGNVVTIDGKGFGTTQGTVTFGGVTAT--VKSWTSNRIEVYVPNMAAGLTDVKVTAGGVSSNL-YSYNILSGTQTSVVFTVKSAPPTNLGD--KIYLTGNIPELGNWSTDTSGAVNNAQGPLLAPNYPDWFYVFSVPAGKTIQFKFFIKRADGTIQWENGSNHVATTPTGATGNITVTWQN |
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General information:
TITO was launched using:
| RESULT:
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Template: 1QHO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -31407 for 711 contacts (-44.2/contact) +
2D Compatibility (PS) -12092 + (NN) 1811 + (LL) 300
1D Compatibility (HY) -2000 + (ID) 1100
Total energy: -44488.0 ( -62.57 by residue)
QMean score : 0.000
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