Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRYRPFGSTGVAVSALTLRLADNP-----RLRANDWRALVFTALENGVNSFQIDGDAP--ELLKGAGEAFASVERHLLFLTWRLR---G---D-----AKQLGPHTLDALKRSAFEGLSLDYLDLLLINDPQSASLPMAFESGLQDLQKGRALRGLGVASRGDID-PGLLANDLVTAVSSPYNLSSGWAERHRIRQASQNNFAVIGEDFWPQALREVADKAPPK----------PSFWQR-RTDPLADVGGYEFLTNTPGWSAEDICLGYALTEPSLATVRVTADNRQEIERLAAVVERDLPTGVCAQIEMARFSAQEREKAARRP |
3N2T Chain:A ((3-313)) | SDTIRIPGIDTPLSRVALGTWAIGGWMWGGPDDDNGVRTIHAALDEGINLIDTAPVYGFGHSEEIVGRALAEKPNK-AHVATKLGLHWVGEDEKNMKVFRDSRPARIRKEVEDSLRRLRVETIDLEQIHWPDDKTPIDESARELQKLHQDGKIRALGVSNFSPEQMDIFREVAPLATIQPPLNLFERTIEKDILPYAEKHNAVVLAYGALCRGLLTGKMNRDTTFPKDDLRSNDPKFQKPNFEKYLAAMDEFEKLAEKRGKSVMAFAVRWVLDQ-GPVIALWGARKPGQVSGVKDVFGWSLTDEEKKAVDDIL------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3N2T.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -101827 for 2349 contacts (-43.3/contact) +
2D Compatibility (PS) -29066 + (NN) -3053 + (LL) 1124
1D Compatibility (HY) -4000 + (ID) 2150
Total energy: -138972.0 ( -59.16 by residue)
QMean score : 0.358
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