Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQRQPVSSSRILSIGYDPDNRMLEIQFREQGTYQYLGVPERAHQNFMSAVSKGRFFDGVIKGKFLCRKIG
3K8R Chain:A ((24-64))
-------EPRAAKARYDRSSARVIVDLENGCTF---AFPPRLAQGLEGASD-------------------
General information:
TITO was launched using:
RESULT:
Template:
3K8R.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -3876 for 193 contacts (-20.1/contact) +
2D Compatibility (PS) -4241 + (NN) -979 + (LL) 1880
1D Compatibility (HY) -400 + (ID) 400
Total energy: -8016.0 ( -41.53 by residue)
QMean score : 0.168
(partial model without unconserved sides chains):
PDB file :
Tito_3K8R.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3K8R-query.scw
PDB file :
Tito_Scwrl_3K8R.pdb
: