Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKLLNTLVCIIGLTSFSSSAKLVNAEHLDALYQKVTVANKTELGLIHIYSEFPDYRWVKDPIEGVSAIDDVARAAIFYQRQYQAT---GSAADLEKVKSLVEFILYQ-R--ADNGYFYNFIYPDHSINKEYKTSVAEPNWWTWRALWALTQVYPTLVKTDNALAQRTRETIFATIDVIYKDFNFKQTRGEKEGVAVPEWLPHTAGDQASVLLMAL-SDAQALEAK--PEIEKMMRSLAAGIMLMQVKDT--SSPVNGAFLSWQ----NLWHGYGNSQAYA---LLVAGNRLGDRDMIKAAFNEL-DHFHPWLISN--GLLNEFTVRQQGEKVTLIEQKK--FSQIAYI-IRPMVFANIKAWEISRDAVYLERAVDLSLWFFKNNPAQAQMYYPVTGIAFDGIDSATTVNKNS--GAESTIEALLTLQLIESIPDAKRMLESALEKRNIKQ |
| 1FP3 Chain:A ((29-388)) | -----------------------------------HSHDREHGGF-FT-C-LGRDGRVYDDLKY---VWLQGRQVWMYCRLYRKLERFHRPELLDAAKAGGEFLLRHARVAPPEKKCAFV--LTRDGRPVKVQR---SIFSECFYTMAMNELWRVTA--EARYQSEAVDMMDQIVHWVRE-----DPSGLGRPQLPGAVASES--MAVPMMLLCLVEQLGEEDEELAGRYAQLGHWCARRILQHVQRDGQAVLENVSEDGEELSGCLGRHQNPGHA-LEAGWFLLRHSSRSGDAKLRAHVIDTFLLLPFRSGWDADHGGLFYF-QDADGL-----CPTQLEWAMKLWWPHSEAMIAFLMGYSESGDPALLRLFYQVAEYTF------RQFRDPEYGEWFGYLN-REGKVALTIKGGPFKGCFHVPRCLA--------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1FP3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -141869 for 2710 contacts (-52.4/contact) +
2D Compatibility (PS) -35490 + (NN) -13319 + (LL) 7472
1D Compatibility (HY) -1200 + (ID) 2100
Total energy: -186506.0 ( -68.82 by residue)
QMean score : 0.303
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