Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
SDTRKAIDTISNLLKIKPIYIESMLQEMGPRQTQMFIRSTSNGSAEEVRKAAYLVFIYHTFIKNP--SDENVELWRNTLIRAQISPILAAEHTDAALFYFAELDLDAFELAQFRRHYNLHFNPEPGTLLH
2H5N Chain:A ((40-121))
---IAVMTREFMRFGILQDQVDLLLKASDSIEASQAVALIARMDEE--RKKYVASYLGVIMASDGDIDDNELALWTLISTLCGLPTM-------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2H5N.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -21080 for 433 contacts (-48.7/contact) +
2D Compatibility (PS) -8464 + (NN) -4223 + (LL) 3680
1D Compatibility (HY) -1200 + (ID) 400
Total energy: -31687.0 ( -73.18 by residue)
QMean score : 0.126
(partial model without unconserved sides chains):
PDB file :
Tito_2H5N.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2H5N-query.scw
PDB file :
Tito_Scwrl_2H5N.pdb
: