Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -------------------MKKVL----------LLV------FLSLTWLSASAQALVPITWTAYGLTFEAPKGILVEEDTEETFLLNNSRFYITIQSLDSDGMT----KSDLKSVLKDYAN-----------DDGVKDQSAVQEFELPQFFGTYL----KGSCETDHCLYACLMTKAA-GSGFYISIIYSKENENIAEKILKSFTMEE---- |
| 1CHD Chain:? ((152-349)) | LLSSEKLIAIGASTGGTEAIRHVLQPLPLSSPAVIITQHMPPGFTRSFAERLNKLCQISVKEAEDGERVLPGHAYIAPGDKHMELARSGANYQIKIHDGPPVNRHRPSVDVLFHSVAKHAGRNAVGVILTGMGNDGAAGMLAMYQA------GAWTIAQNEASCVVF------GMPREAINMG-GVSEVVDL--SQVSQQMLAKISAGQAIRI |
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General information:
TITO was launched using:
| RESULT:
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Template: 1CHD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -26091 for 922 contacts (-28.3/contact) +
2D Compatibility (PS) -15216 + (NN) -7930 + (LL) 1248
1D Compatibility (HY) -1600 + (ID) 1050
Total energy: -50639.0 ( -54.92 by residue)
QMean score : 0.255
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