Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | GEEKMTNGQLWKKVKDSLIDSNIISGNENEEITVTYVNKTGYSSSVSAYGNNNDDFSSTPSNFSKLKEIDLKKDNVPSDDFNTTVSGEDSWKTLTSKLKEKGLVTDGQTVTIHCNDKSDNTKSSVSGKVGADLTSGNGTTFKKRFIDKITID |
2RDG Chain:A ((126-194)) | --EEISLKELDFKLRKHLIDKHDLYKTEPKDSKIRVTMKNGDFYTFELNKKLQTHRMGDVIDGRNIEKIEV--------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2RDG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 761 for 412 contacts (1.8/contact) +
2D Compatibility (PS) -7712 + (NN) -6861 + (LL) 2464
1D Compatibility (HY) -1600 + (ID) 500
Total energy: -13448.0 ( -32.64 by residue)
QMean score : 0.167
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