Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | -----MGDHAWSFLKDFLAGGVAAAVSKTAVA-------PIERVKLLLQVQHA----------------SKQISAE---KQYKGIIDCVVRIPKEQGFLSFWRGNLANVIRYFPTQALN---------FAFKDKYK-QLFL-----GGVDRHK---QFWRYFAGNLASGGAAGATSLCFVYPLDFARTRLAADVGKGAAQREFHGLGDCIIKIF-KSDGLRGLYQGFNVSVQGIIIYRAAYFGV---------YDTAKGMLPDPKNVH---------IFVSWMI----AQSVTAVAGLVSYP------FDTVRRRMMMQSGRKGADIMYTGTVDCWRKIAKDEGAKAFFKGAWSNVLRGMG----GAFVLVLYDEIKKYV-- |
1ZY7 Chain:A ((8-402)) | SRQPIPSEGLQLHLPQVLADAVSRLVLGKFGDLTDNFSSPHARRKVLAGVVMTTGTDVKDAKVISVSTGTKCINGEYMSDRGLALNDCHAEIISRRSLLRFLYTQLELYLNNKDDQKRSIFQKSERGGFRLKENVQFHLYISTSPCGDARIFKARGQLRTKIESGEGTIPVRSNASIQTWDGVLQGERLLTMSCSDKIARWNVVGIQGSLLSIFVEPIYFSSIILGSLY--HGDHLSRAMYQRISNIEDLPPLYTLNKPLLSGISNAEARQPGKAPNFSVNWTVGDSAIEVINATTGKDELGRASRLCKHALYCRWMRVHGKVPSHLLRSKITK-PNVYHESKLAAKEYQAAKARLFTAFIKAGLGAWV-EKPTEQDQFSLT |
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General information:
TITO was launched using:
| RESULT:
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Template: 1ZY7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -109998 for 2258 contacts (-48.7/contact) +
2D Compatibility (PS) -30006 + (NN) 9040 + (LL) 396
1D Compatibility (HY) -8400 + (ID) 2700
Total energy: -141668.0 ( -62.74 by residue)
QMean score : 0.129
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