Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTHQDLSITAKLINGGVAGLVGVTCVFPIDLAKTRLQNQHGKAMYKGMIDCLMKTARAEGFFGMYRGAAVNLTLVTPEKAIKLAANDFFRRLLMEDGMQRNLKMEMLAGCGAGMCQVVVTCPMEMLKIQLQDAGRLAVHHQGSASAPSTSRSYTTGSASTHRRPSATLIAWELLRT-QGLAGLYRGLGATLLRDIPFSIIYFPLFANLNNLGFNELAGKASFAHSFVSGCVAGSIAAVAVTPLDVLKTRIQTLKKGLGEDMYSGITDCARKLWIQEGPSAFMKGAGCRALVIAPLFGIAQGVYFIGIGERILKCFD |
4DOX Chain:A ((11-174)) | ---------------------------------------------------------------------IAFPAITQEQMSSIKVDPT-SNLLPSQEQLKSVSTLMVAA-----------------KVPAASVTTVALELVNFCYDNGSSAYTTVTGPSSIPEISLAQLASIVKASGTSLRKFCRYFAPIIWNLR--TDKMAP--ANWEASGYKPSAKFAAF--DFFDG-VENPAAMQPPSGLTRSPTQEERIANATN---------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4DOX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -23815 for 1180 contacts (-20.2/contact) +
2D Compatibility (PS) -17000 + (NN) -3517 + (LL) 10996
1D Compatibility (HY) -2000 + (ID) 1400
Total energy: -36736.0 ( -31.13 by residue)
QMean score : 0.159
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