Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQMDNRLPPKKVPGFCSFRYGLSFLVHCCNVIITAQRACLNLTMVVMVNSTDPHGLPNTSTKKLLDNIKNPMYNWSPDIQGIILSSTSYGVIIIQVPVGYFSGIYSTKKMIGFA---LCLSSVLSLLIPPAAGIG-VAWVVVCRAVQGAAQGIV----ATAQFEIYVKWAPPLERGRLTSMSTSGFLLGPFIVLLVTGVICESLGWPMVFYIFGACGCAVCLLWFVLFYDDPKDHPCISISEKEYITSSLVQQVSSSRQSLPIKAILKSLPVWAISTGSFTFFWSHNIMTLYTPMFINSML---HVNIKENGFLSSLPYLFAWICGNLAGQLSDFFLTRNILSVIAVRKLFTAAGFLLPAIFGVCLPYLSSTFYSIVIFLILAGATGSFCLGGVFINGLDI-APRYFGFIKAC-STLTGMIGGLIASTLTGLILKQDPESAWFKTFILMAAINVTGLIFYLIVATAEIQDWAKEKQHTRL |
| 2CFQ Chain:A ((35-392)) | ---------------------------------------------------------------------HDINHISKSDTGIIFAAISLFSLLFQPLFGLLSDKLGLRKYLLWIITGMLVMFAPFFIFIFG--PLLQYNILVGSIVGGIYLGFCFNAGAPAVEAFIEKVS--RRSNFEFGRARMFGCVGWALGASIVGIMFT-INNQFVFWLGSGCALILAVLLFFAKTDAPSSATVA-NAVGA------NH---SAFSLKLALELFRQPKLWFLSLYVIGVSCTYDVFDQQFANFFTSFFATGEQGTRVFGYVTTMGELLNASIMFFAPLIINRIGGKNAL----------LLAGTIMSVRIIGSSFAT-SALEVVILKTLHMFEVPFLLVGCFKYITSQFEVRFSATIYLVCFCFFKQLAMIFMSVLAGNMYESI---GFQGAYLVLGLVALGFTLISVFTLSGPGPLSLLRRQVNEV |
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General information:
TITO was launched using:
| RESULT:
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Template: 2CFQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -257728 for 2617 contacts (-98.5/contact) +
2D Compatibility (PS) -33610 + (NN) 5166 + (LL) 5700
1D Compatibility (HY) -18800 + (ID) 2350
Total energy: -301622.0 ( -115.25 by residue)
QMean score : 0.157
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