Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----------------------------MKSGPGIQAAIDLTAGAAGGTACVLTGQPFDTIKVKMQTFPDLYKGLTDCFLKT-YAQVG-LRGFYKGTGPAL-MAYVAENSVLFMCYGFCQQFVRKVAGMD--KQAKLSDLQTAAAGSFASAFAALALCPTE----LVKCRLQTMYEMEMSGKIAK--SHNTIWSVVKGILKKDGPLGF-YHGLSSTLLQEVPGYFFFFGGYELSRSFFASGRSKDELGPVHLMLSGGVAG---------ICLWLV--------------VFPVDCIKSRIQVLS------MYGKQAGF------------IG-T------LLSVVRNEGIVALY-----SGLKATMIRA-----IPA-------NGALFVAYEYSRKMMMKQLEAY----------------------- |
| 4R5O Chain:A ((2-427)) | DDCEDLHLGNLAHYPNVLKGTFPTESQVLELGETLEITPELLNPEGATYSWLVNGKEYSTEPTFSYKIDNPCRADLSCIIKNKYGKVEMSTSFSSNHNFSKGFFYVADGTFNFYDTEKKTAYQDCYASLNAGKTLGIGNYDSANIIHSNGKFYLLVGTSTSNRDHFYIVDAKTLY-YENSAVVGANLSGLTILNEQYGLVTGDGIRRIDLKSLNNVRIKN-ERLLCFYNSIIYNGKVLSNDTYKDE-SKVKYYDVNELIAAKEGEAPAVTELDIIQKQKINFVLAKDGNVYTLESADNGCNIVKIKNDFTLEKVFANFQPAKGPYHSSPTIGMVASETENIIYLVSTDGAIYKYILGDSDSLKAPFIAAESGVSITAPLQLNQQSGELYVTYTEERKDESKIVVYSKDGKVLHTVDCGESVPSQILFNN |
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General information:
TITO was launched using:
| RESULT:
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Template: 4R5O.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -156521 for 2003 contacts (-78.1/contact) +
2D Compatibility (PS) -31116 + (NN) 3675 + (LL) 472
1D Compatibility (HY) -18000 + (ID) 2900
Total energy: -204390.0 ( -102.04 by residue)
QMean score : ?
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