Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPVEEFVAGWISGALGLVLGHPFDTVKVRLQTQTTYRGIVDCMVKIYR-HESLLGFFKGMS---FPIAS-------IAVVNSVLFGVYSNTLLVLTATSHQERRAQPPSYMHIFLA------GCTGGFLQAYCLA--------------PFDLIKVRLQNQTEPRAQPGSPPPRYQG-----PVHC----------AASIFREEG--PRGLFRGAWALT---LRDTPTVGIYFITYEGLCRQYTPEGQNPSSATVLVAGGFAGIASWVAATPLDMIKSRMQMDGLRRRVYQGMLDCMVS-SIRQEGL--GVFFRG--------VTINSARAFP-VNAVTFLSYEYLLRWWG------------------------------------------------- |
| 1Q9J Chain:A ((1-418)) | MFPGSVIRKLSHSEEVFAQYEVFTSMTIQLRGVIDVDALSDAFDALLETHPVLASHLEQSSDGGWNLVADDLLHSGICVIDAELRLDQSVSLLHLQLI-LREGGAELTLYLHHCMADGHHGAVLVDELFSRYTDAVTTGDPGPITPQPTPLSMEAVLAQRGIRKAERFMSVMYAYPGLPQAVPVTRLWLSKQQTSDLMAFGREHRLSLNAVVAAAILLTEWQLRNTPHVPIPYVYPVDL-RFVLAPPVAPTEAT-----NLLGAASYLAE-----IGPNTDIVDLASDIVATLRADLANGVIQQSGLHFGTAFEGTPPGLPPLVFCTDATSFPTMRTPPGLEIEDIKGQFYCSISVPLDLYSCAVYAGQLIIEHHGHIAEPGKSLEAIRSLLCTVPSEYG |
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General information:
TITO was launched using:
| RESULT:
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Template: 1Q9J.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -182637 for 1939 contacts (-94.2/contact) +
2D Compatibility (PS) -29425 + (NN) -11698 + (LL) 780
1D Compatibility (HY) -13600 + (ID) 3200
Total energy: -239780.0 ( -123.66 by residue)
QMean score : 0.224
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