Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLLGASLVGVLLFSKLVLKLPWTQVGFSLLFLYLGSGGWRFIRVFIKTIRRDIFGGLVLLKVKAKVRQCLQERRTVPILFAST-----VRRHPDKTALIFEGT---DTHWTFRQLDEYSSSVANFLQ-ARGLASGDVAAIFMENRNEFVGLWLGMAKLGVEAALINTNLRRDALLHCLTTSRARALVFGSEMASAICEVHASLDP-SLSLFCSGSWEPGAVPPSTEHLDPLLKDAPKHLPSCPDKGFTDKLFYIYTSGTTGLPKAAIVVHSRYYRMAALVYYGFRMRPNDIVYDCLPLYHSAGNIVGIGQCLLHGMTVVI--RKKFSASRFWDDCIKYNCTIVQYIGELCRYLLNQPPREAENQHQVR--MALGNGLRQSIWTNFSSRFHIPQVAEFYGATECNCSLGNF---DSQVGACGFNSRILSFVYPIRLVRVNEDTMELIRGPDGVCIPCQPGEPGQLVGRIIQKDPLRRFDGYL-NQGANNKKIAKDVFKKGDQAYLTGDVLVMDELGYLYFRDRTGDTFRWKGENVSTTEVEGTLSRLLDMADVAVYGVEVPGTEGRAGMAAVASPTG------NCDLERFAQVLEKELPLYARPIFLRLLPELHKTGTYKFQKTELRKEGFDPAIVKDPLFYLDAQKGRYVPLDQEAYSRIQAGEEKL |
| 3C5E Chain:A ((40-562)) | ---------------------------------------------------------------------------ASDVLDHWADMEKAGKRPPSPALWWVNGKGKELMWNFRELSENSQQAANVLSGACGLQRGDRVAVVLPRVPEWWLVILGCIRAGLIFMPGTIQMKSTDILYRLQMSKAKAIVAGDEVIQEVDTVASECPSLRIKLL-VSE--K--SCDGWLNFKKLLNEASTTHHC-VETGSQEASAIYFTSGTSGLPKMAEHSYSSLGLKAKMDAGWTGLQASDIMWTISDTGWILNILCSLMEPWALGACTFVHLLPKFDPLVILKTLSSYPIKSMMGAPIVYRMLLQQDLSSY-KFPHLQNCVTVGESLLPETLENWRAQTGL-DIRESYGQTETGLTCMVSKTMKIKPGYMGTA------ASCYDVQIIDDK---------G--NVLPPGTEGDIGIRVKPIRPIGIFSGYVDNPDKTAANI-------RGDFWLLGDRGIKDEDGYFQFMGRADDIINSSGYRIGPSEVENALMEHPAVVETAVISSPDPV-RGEVVKAFVVLASQFLSHDPEQLTKELQQHVKSVTAPYKYPRKIEFVLNLPKTVTGKIQRAKLRDKEWK------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3C5E.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -333365 for 4261 contacts (-78.2/contact) +
2D Compatibility (PS) -54042 + (NN) -28264 + (LL) 11644
1D Compatibility (HY) -17200 + (ID) 5500
Total energy: -426727.0 ( -100.15 by residue)
QMean score : 0.452
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