Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---------------MCRCPPEHHDGRMTS-AEVGAAAGGAQAAGPPEWP--------PGSPQALRQPGR-----------ARVAMAALVWLLAGASMSSLNKWIFTVHGFGRPLLLSALHMLVAALACHRGARRPMPGGTRCRVLLLSLTFGTSMA-CGNVGLRAVPLDLAQLVTTTTP--------LFTLALSALLLGRRHHPLQ------LAAMGPLCLGAACSLAGEF-RTPPTGCGFLLAATCLRGLKSVQQSALLQEERLDAVTLLYATSLPSFCLLAGAALVLEAGVAPPPTAGDSRLWACI--------LLSCLLSVL---------YNLASFSLLALTSALTVHVL----GNLTVVGNLILS-----------RLLFGSRLSALSYVGIALTLSGM-----FLYHNCEFV--------ASWAARRGLWRRDQPSKGL---------- |
| 4UQU Chain:A ((1-462)) | AEKEKNAAEIRQQFAMTAGSPIIVNDKLERYAEVRTAFTHPTSFFKPNYKGEVKPWFLSAYDEKVRQIENGENGPKMKAKNVGEARAGRALEAAGWTLDINYGNIYPNRFF---MLWSGETMTNTQLWAPVGLDRRPPDTTDPVELTNYVKFAARMAGADLVGVARLNRNWVYSEAVTIPADVPYEQSLHKEIEKPIVFKDVPLPIETDDELIIPNTCENVIVAGIAMNREMMQTAPNSMACATTAFCYSRMCMFDMWLCQFIRYMGYYAIPSCNGVG-----QSVAFAVEAGLGQA-----SRMGACITPEFGPNVRLTKVFTNMPLVPDKPIDFGVTEFCETCKKCARECPSKAITEGPRTFEGRSIHNQSGKLQWQNDYNKCLGYWPESGGYCGVCVAVCPFTKGNIWIHDGVEWLIDNTRNITEVWDGKINTYGLDADHFRDTVSFRKDRVK |
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General information:
TITO was launched using:
| RESULT:
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Template: 4UQU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -203859 for 2559 contacts (-79.7/contact) +
2D Compatibility (PS) -34419 + (NN) -1396 + (LL) 108
1D Compatibility (HY) -8400 + (ID) 3050
Total energy: -251016.0 ( -98.09 by residue)
QMean score : 0.106
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