Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --------------MKQAGFPLGILLLFWVSYVTDFSLVLLIKGGALSGTDTYQSLVNKTFGFP---GYLLLSVLQFLYPFIAMISYNIIAGDTLSKVFQRIPGVDPENVFIGRHFIIGLSTVTFTLPLSLYRNIAKLGKVSLISTG-LTTLILGIVMARAISLGPHIPKTEDAWVFAKPNAIQAVGVMSFAFICHHN-----------SFLVYSSLEEPTVAKWS----RLIHMSIVISVFICIFFATCGYLTFTGFTQGDLFENYCRNDDLVTF--------------------------------------------GRFCYG-------VTVILTYP-------MECFVTREVIANVFFGGNLSSV----FHIVVT----------------------------------VMVITVATLVSLLIDCLGIVLELNGVLCATPLIFIIPS-ACYLKLSEEPRTHSDKIMSCVMLPIGAVVMVFGFVMAITNTQD--------CTHGQEMFYCF-------PDNFSLTNTSESHVQQTTQL----STLNISIFQ---------------------------- |
| 4IA6 Chain:A ((1-591)) | MYYSNGNYEAFADPKKPAGVDKKSAYIIGSGLAGLSTAVFLVRDAQMKGENIHILEELPVAGFVVRGGREMENHFECLWDMYRSIPSLEVPGASYLDEYYWLDKEDP-NSSNCRLIYNRGDRLPSDGQYGLGKCANEIVKLIMTPEKEIEGQTIEEFFSDEFFKTNFWTYWSTMFAFEKWHSLAEMRRYAMRFIHHIDGLPDFTALKFNKYNQYESMVKPLLAYLKDHGVQFEYDCHVKNVEVDHEGDSKIAKKIVMTQNGKDKEIDLTHNDIVFVTNGSITESSTYGDQNTPAPITNAKGDSWKLWENLAKQDPAFGHPDVFCENLPERSWFVSATATLENKKLAPYFERLTKRSLYDGKVNTGGIITIVDSNWELSFTIHRQPHFKSQNPDQIVVWIYALYSDTEGNYIKKRIVDCTGKEIAEELLYHLGVPESQISELASEENMNTVPVYMPYITSYFMPRRDGDRPD---VVPEGSINLAFIGNFAESPTRDTVFTTEYSVRTAMEAVYTLLNVDRGVPEVFDSIYDIRQLLRAMYYMSDKKKLADQDMPLPEKLAVKTGMRKIKKTWVEELLKEANLV |
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General information:
TITO was launched using:
| RESULT:
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Template: 4IA6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -332351 for 2959 contacts (-112.3/contact) +
2D Compatibility (PS) -41143 + (NN) 8648 + (LL) 324
1D Compatibility (HY) -2000 + (ID) 3050
Total energy: -369572.0 ( -124.90 by residue)
QMean score : 0.131
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