Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAGQGLPLHVATLLTGLLECLGFAGVLFGWPSLVFVFKNEDYFKDLCGPDAGPIGNATGQADCKAQDERFSLIFTLGSFMNNFMTFPTGYIFDRFKTTVARLIA---IFFYTTATLIIAFTSAGSAVLLFLAMPMLTIG-GIL----FLITNLQIGNLFGQHRSTIITLYNGAFDSSSAVFLI-IKLLYEKGISLRASFIFISVCSTWHVARTFLLMPRGHIPYPLPPNYSYGLCPGNGTTKEEKETAEHENRELQSKEFLSAKEETPGAGQKQELRSFWSYAFSRRFAWHLVWLSVIQLWHYLFIGTLNSLLTNMA---GGDMARVSTYTNAFAFTQFGVLCAPWNGLLMDRLKQKYQKEARKTGSSTLAVALCSTVPSLALTSLLC-LGFALCASVPILPLQYLTFILQVISRSFLYGSNAAFLTLAFPSEHFGKLFGLV-MALSAVVSLLQFPIFTLIKGSLQNDPFYVNVMFMLAILLTFFHPFLVYRECRTWKESPSAIA |
| 2CFQ Chain:A ((38-383)) | ---------------------------------------------------------NHIS-----KSDTGIIFAAISLFSLLFQPLFGLLSDKLGLRKYLLWIITGMLVMFAPFFIFIFGPL-LQYNILVGSIVGGIYLGFCFNAGAPAVEAFIEKVSR-RSNFEFGRARMFGCVGWALGASIVGIMF-T-INNQFVFWLGSGCALILAVL-LFFAKTD---APSSATVAN---------AVG-A-----------------------NHSAFSLKLALELFRQPKLWFLSLYVIGVSCTYDVFDQQFANFFTSFFATGEQGTRVFGYVTTMGEL--LNASIMFFAPLIINRIGGKNA---------------------LLLAGTIMSVRIIGSSFATSALEVVILKTLHMFEVPFLLVGCFKYITSQFEVRFSATIYLVCFCFFKQLAMIFMSVLAGNMYESIGFQGAYLVLGLVALGFTLISVFTLSGPGPLSLLRRQVNEV |
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General information:
TITO was launched using:
| RESULT:
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Template: 2CFQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -215243 for 2461 contacts (-87.5/contact) +
2D Compatibility (PS) -33187 + (NN) -5617 + (LL) 5676
1D Compatibility (HY) -18800 + (ID) 1650
Total energy: -268821.0 ( -109.23 by residue)
QMean score : 0.185
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