Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEAARTAVLRVKRKRSAEPAEALVLACKRLRSDAVESAAQKTSEGLERAAENNVFHLVATVCSQEEPVQPLLREVLRPSRDSQQRVRRNLRASAREVRQEGRYRVLSSRRSLGTTSSGQESEYTPGNPEAAGNSGFQLLDLVHEEGEPEAASAGSCKTSDPDVILCNSVELIRERLTVSEDGPGVRRQEEQKHDDYVYDIYYLE-TATPGWIENILSVQPYSQEWELVNDDQEPE-----DIYDDEDDENSENNWRNEYPEEESSDGDEDSRGSADYNSLSEEERGSSRQRMWSKYPLDVQKEFGYDSPHDLDSD |
| 4GOX Chain:A ((13-303)) | -------KQWQKPDHKNPNPIAFILSSPRSGSTLLRVMLAGHPGLYSPPELHLLPFETMGDRHQELGLSHLGEGLQRALMDLENLTPEASQAKVNQWVKANTPIADIYAYLQRQAEQRLLIDKSPSYGSDRHILDHSEILF-------------------------DQAKYIHLVRHPYAVIESFTRLRMDNPYALAESIWRTSNRNILDLGRTVGADRYLQVIYEDLVRDPRKVLTNICDFLGVDFDEALLNPYSGDRLTDVGDP--NFLQHKTIDPALADKWRSITLPAALQLDTIQLAETFAYDLP------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4GOX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 120491 for 2158 contacts (55.8/contact) +
2D Compatibility (PS) -27352 + (NN) 2223 + (LL) 1636
1D Compatibility (HY) 1600 + (ID) 1350
Total energy: 97248.0 ( 45.06 by residue)
QMean score : 0.041
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