Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTGAKRKKKSMLWSKMHTPQCEDIIQWCRRRLPILDWAPHYNLKENLLPDTVSGIMLAVQQVTQGLAFAVLSSVHPVFGLYGSLFPAIIYAIFGMGHHVATGTFALTSLI---SANAVERIVPQNMQNLTTQSNTSVLGLSDFEMQRIHVAAAVSFLGGVIQVAMFVLQLGSATFVVTEPVISAMTTGAATHVVTSQVKYLLGMKMPYISGPLGFFYIYAYVFENIKSVRLEALLLSLLSIVVLVLVKELNEQFKRKIKVVLPVDLVLIIAASFACYCTNMENTYGLEVVGHIPQG--IPSPRAPPMNILSAVITEAFGVALVGYVASLALAQGSAKKFKYSIDDNQEFLAHGLSNIVSSFFFCIPSAAAMGRTAGLYSTGAKTQVACL-ISCIFVLIVIYAIGPLLYWLPMCVLASIIVVGLKGMLIQFRDLKKYWNVDKIDWGIWVSTYVFTICFAANVGLLFGVVCTIAIVIGRFPRAMTVSIKNMKEMEFKVKTEMDSETLQQVKIISINNPLVFLNAKKFYTDLMNMIQKENACNQPLDDISKCEQNTLLNSLSNGNCNEEASQSCPNEKCYLILDCSGFTFFDYSGVSMLVEVYMDCKGRSVDVLLAHCTASLIKAMTYYGNLDSEKPIFFESVSAAISHIHSNKNLSKLSDHSEV |
| 4LZ6 Chain:A ((1-446)) | -----QKQQSERLGTEAIPK---------------------LLRSLSIPAMIGMFVMALYNVVDTIFISYAVGIEGVAGVT-IAFPIMMIMMSMAGALGIGGASVISRRLGERRGEEANQVFGNILTVILVLSVIGFISAFTLLGPALQLFGATSVTQGYATDYLFPILLG------------------------------------------SIFFFFAFAANNIIRSEGNATFAMVTMIVPAVLNILLDVLF------IFGLNMGVLGASI---ATVIAQASVTGLVLRYFLTGKSTLSLHWSDLRMKGSVIKEVCLVGLPAFVQQSSASLMMIAINSMLLRFGSDFY--------------------VGVFGLVQRIMMFVMMPMMGIMQAMQPIVGYNYGAKQY----SRLRETVMLGFKVATIF--------------------------------------------SIGIFALLML-----FPEALLRVFTADREVIQAGVSAMHILFCVTFLIGAQIVAGGLY-------------------------------------QSLGKPKQALILSLSRQIIFLIPLVLILPHIFGLSGVWWAFPIADVLSFILTVVLLY-----RDRNVFFLK----------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4LZ6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -298195 for 3791 contacts (-78.7/contact) +
2D Compatibility (PS) -44080 + (NN) -6781 + (LL) 15132
1D Compatibility (HY) -22400 + (ID) 3900
Total energy: -360224.0 ( -95.02 by residue)
QMean score : 0.221
|
|
|