Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---------MEAGGFLDSLIY-GACVVFTLGMFSAGLSDLRHMRMTRSVDNVQFLPFLTTEVNNLGWLS-----YGALKGD-----------------------------------GILIVVNTVGAAL-----------QTLYI-------LAYLHYC---PRKRVVLLQTATLLGV--LLLGYGYFWLLVPNPEARLQQLGLFCS--VFTISMYLSPLADLAKVIQTKSTQCLSYPL--TIATLLTSASWCLYGFRLRDPY-----IMVSNFPGIVTS-------------FIRFWLFWKYPQEQDR----NYWLLQT-- |
| 4LDV Chain:A ((16-356)) | SDALCRELWHACAGPLVTLPREGERVYYFPEGHMEQLEASMHQGLEQQMPSFNLPSKILCKVINIQRRAETDEVYAQITLLPELDQSEPTSPDAPVQETVHSFCKTLTASDTSTHGGFSVLRRHADDCLPPLDMSQQPPWQELVATDLHNSEWHFRHIFRGQPRRHLLTTGWSVFVSSKKLVAGDAFIFLRGENEELRVGVRRHMPSSVISSHSMHIGVLATAAHAITTGTIFSVFYKPRTSRSEFIVSVNRYLEAKTQKLSVGMRFKMRFKRFSGTIVGVQENKSSVWHDSEWRSLKVQWDEPSSVFRPERVSPWELEPLN |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4LDV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -184904 for 1404 contacts (-131.7/contact) +
2D Compatibility (PS) -23038 + (NN) 5347 + (LL) 0
1D Compatibility (HY) -4000 + (ID) 2050
Total energy: -208645.0 ( -148.61 by residue)
QMean score : 0.264
|
|
|