Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MYMKKLKFITLTLAIIITLPMLQSCLDDNDHQSRSLVISTI-NQISEDSKEFYFTLDNGKTMFPSNSQAWGGEKFENGQRAFVIFNELEQPVNGYDYNIQVRDITKVLTKEIVTMDDEENTEEKIGDDKINATYMWISKDKKYLTIEFQYYSTHSEDKKHFLNLVINNKEADSAAENEDNTDDEYINLEFRHNSERDSPDH--LGEGYVSFKLDKIEEQIEGKKGLNIRVRTLY--DGIKNYKVQFP |
| 3BOE Chain:A ((2-210)) | ----------------ISPAQIAEALQGRGWDAEIVTDASMAGQLVDVRPEGILKCVDGR---GSDNTRMGGPKMPGGIYAIAHNRGVT---SIEGLKQITKEVASKGHLPSVHGDHSS--------DMLGCGFFKLWVTGRFDDMGYPRPQFDADQGANAVKDAGGIIEMHHGSHTEK---VVYINLLANKTLEPNENDQRFIVDGWAADKFG-----LDVPKFLIAAAATVEMLGGPKNAKIVVP |
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General information:
TITO was launched using:
| RESULT:
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Template: 3BOE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 52892 for 1741 contacts (30.4/contact) +
2D Compatibility (PS) -20392 + (NN) 2109 + (LL) 3476
1D Compatibility (HY) -1200 + (ID) 1600
Total energy: 35285.0 ( 20.27 by residue)
QMean score : 0.148
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