Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKKTNKIIFIVFIVIFIGLSYRHFTNTDKARMEISSLSSIDVFKFNSFSKFSNDKIGVIYDEEKLSKFKVIMNSLDTSEGIKKIEVPKDANIESFKYSYHIQPNLKYVEDNNVYDGYFLLYILVGDSEGKSYIIFSGTELSYVLDKNNTNILKEIFLNVKKQQ
1WID Chain:A ((259-289))
---------------------------------------------------------------------------------------------------------RFVKEKNLRAGDVVSFSRSNGQDQQLYIGWK---------------------------
General information:
TITO was launched using:
RESULT:
Template:
1WID.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -16137 for 118 contacts (-136.8/contact) +
2D Compatibility (PS) -3739 + (NN) -3215 + (LL) 9584
1D Compatibility (HY) -800 + (ID) 250
Total energy: -14557.0 ( -123.36 by residue)
QMean score : 0.079
(partial model without unconserved sides chains):
PDB file :
Tito_1WID.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1WID-query.scw
PDB file :
Tito_Scwrl_1WID.pdb
: