Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKRALSLLLALCLCLSLMPAASASVVESTVQVGPYTFEIWFDGTATLTRY-DESLAGSTYADIPASVTDENGQEYPVTVIGEKAFEET-NITGVTVPDS-VISIGRLAFAYCNSLSDVKLSEN-LIYINELAFASCDALKEITIPAS-VEKM-DNPFRWSNALDTVYMEGM-VAPE------------------------------------------------ |
1W8A Chain:A ((542-733)) | ------------------------DCPAMC---------HCEGTTVDCTGRGLKEIPRDIPLHTTELLLNDNELGRI---SSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLAWFAEWLRKKSLNGGAARCGAPSKVRDVQIKDLPHSEFKCSSEGC |
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General information:
TITO was launched using:
| RESULT:
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Template: 1W8A.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -65417 for 965 contacts (-67.8/contact) +
2D Compatibility (PS) -13254 + (NN) 1567 + (LL) 3668
1D Compatibility (HY) -4400 + (ID) 850
Total energy: -78686.0 ( -81.54 by residue)
QMean score : 0.180
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