Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKKRALSLLLALCLCLSLMPAASASVVESTVQVGPYTFEIWFDGTATLTRY-DESLAGSTYADIPASVTDENGQEYPVTVIGEKAFEET-NITGVTVPDS-VISIGRLAFAYCNSLSDVKLSEN-LIYINELAFASCDALKEITIPAS-VEKM-DNPFRWSNALDTVYMEGM-VAPE------------------------------------------------
1W8A Chain:A ((542-733))------------------------DCPAMC---------HCEGTTVDCTGRGLKEIPRDIPLHTTELLLNDNELGRI---SSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLAWFAEWLRKKSLNGGAARCGAPSKVRDVQIKDLPHSEFKCSSEGC


General information:
TITO was launched using:
RESULT:

Template: 1W8A.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -65417 for 965 contacts (-67.8/contact) +
2D Compatibility (PS) -13254 + (NN) 1567 + (LL) 3668
1D Compatibility (HY) -4400 + (ID) 850
Total energy: -78686.0 ( -81.54 by residue)
QMean score : 0.180

(partial model without unconserved sides chains):
PDB file : Tito_1W8A.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1W8A-query.scw
PDB file : Tito_Scwrl_1W8A.pdb: