Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLTVEVEVKITADDENKAEEIVKRVIDEVEREVQKQYPNATITR-----------------------------------------------TLTRDDGTVELRIKVKADTEEKAKSIIKLIEERIEEELRKRDPNATITRTVRTEVGSSWSLEHHHHHH
2QYV Chain:A ((265-383))
---SVATLVF-NGDITVLQSAVQKFADVIKAELALTEPNLIFTLEKVEKPQQVFSSQCTKNIIHCLNVLPNGVVRNSDVIENVVETSLSIGVLKTEDNFVRSTMLVRSLIESGKSYVASLLKS------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2QYV.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -5845 for 289 contacts (-20.2/contact) +
2D Compatibility (PS) -8051 + (NN) -3850 + (LL) 2936
1D Compatibility (HY) -2800 + (ID) 650
Total energy: -18260.0 ( -63.18 by residue)
QMean score : 0.416
(partial model without unconserved sides chains):
PDB file :
Tito_2QYV.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2QYV-query.scw
PDB file :
Tito_Scwrl_2QYV.pdb
: