Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ------------------MKRLLLITLLIGY----IYPCVAQDKPIRTEESLEGTVIYKKTTTFEVDGYTYQCDVDDGSQFVTLYNKENKLTYEKIVYK-----DTGKTYIGSWSSNVIEYDRFMSQQADFIVDQAFTKAMADEI-------------GKTELMITMLLSPNTGEVMEVNFNFFTFEPYAKVPLHVYREIEVKLKEQIHFKPIEEGKQLNYIMLAW--------MQKPQGKLPPLPPPGSLM |
| 2J0A Chain:A ((9-277)) | ELQLGDIFIAVKTTWAFHRSRLDLLLDTWVSRIRQQTFIFTDSPDERLQERLGPHLVVTQCALSCKMAAEFDAFLVSGLRWFCHVDDDNYVNPKALLQLLKTFPQDRDVYVGKPSLF-----WFATGGAGFCINRQLALKMVPWASGSHFVDTSALIRLPDDCTVGYIIECKLGGRLQPSPLFHSHLE----TLQLLGAAQLPEQVTLSYGVFEGKLNVIKLPGPFSHEEDPSRFRSLHCLLYPDTPWCPLL |
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General information:
TITO was launched using:
| RESULT:
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Template: 2J0A.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -29261 for 1466 contacts (-20.0/contact) +
2D Compatibility (PS) -20780 + (NN) -7871 + (LL) 1008
1D Compatibility (HY) -6800 + (ID) 1150
Total energy: -64854.0 ( -44.24 by residue)
QMean score : 0.235
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