Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----------------------------------------------MALSLCVLFTLAS------VVSGHVAHPSLGRGDGFPFLWDN----AASTLDQLNGTDTTIILNGFNYLDRL-----SMFKTVLEGTRKYFDSFAPNNTANIYWG-------------------FTIY-LNWILATGRSADPTGHTTCGLAHGDPM----------------CLAEESWWNCIKYNPAAIAFFAAKKAGIFGDVTKTI--VLAKPKEANSPYCSSEEECQAAY-----PDVMATYLDYFEYLMS-LEKTGESIDMDKAQQLLW-KAHVTSMENSIAVCK-PRLKNYNIIERQLDRDYLISLLYFAATNFPT-----NFIESIKFVADMPHRQLR-FGDIAPFIPDMDMKKNNLLVVLHGFYTVHSLSGGSSLTHWRNLMESPVSREMARDMVNLILAG-TPVEVQVEL----AKLGIPTPVDYKDDDK--- |
| 4K70 Chain:A ((2-483)) | PGSMEALVRALEEADHAVATVVQSRILEFFMAAGRETPAGVRGLWARALRLACRAYVETGTCEAAVLAENLAGLALWR---LRHDWDEGTAPLLELLGVVNGDDTTAALTEAGLRTSAEFGPDAMFRLVSEWCAAFDEALAGARSADDVLAAPRVVPPEQTARALVQPRFATLYDMDFVQDGLRYVAQHTNWALPLALAVRQMQNEGLKPLTRALFALTIADEFFHD--RQNPTLREQFAEAARAVDEAALVPVGEVNATPRTAVEVRVSAALAHGDAYVRELRPGTVARRLRTDQGVLALLDPGAQAVHVAAAADLDHTQVDATGVWEAVQASASPLQVVEALVTAGFTRRHCDLLERAVLDRAPRLTDAQRAVGCTAVVGGVVHRLLDDYGPGLDYVRAYTDVADTLEPLYGDVTAALGLPEKGVEHVVRHCMAPRPPTEHVGAARAALLREVAAAERRAGLAHSAAREALNTWLAFRAQSRWGL |
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General information:
TITO was launched using:
| RESULT:
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Template: 4K70.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -110421 for 2689 contacts (-41.1/contact) +
2D Compatibility (PS) -36685 + (NN) 2847 + (LL) -160
1D Compatibility (HY) -4400 + (ID) 3300
Total energy: -152119.0 ( -56.57 by residue)
QMean score : 0.207
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