Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ------------------MSYTLFEIGPFALDSFGWKETIPPKKDGDSEKVVRMASPIIVNARFSDPITGVEKLIITNNNGKKDIFESDILTTRNLPSLIKYGY----SINEKYIRSLSYALQLMRDRLPLSELYEGVGILETPFGYLISLDKVLKSIQFNQSSPSYPIVDSAYDLTPKGTFDNWFNMYIDEVKGHLLLELAV-IFGISALVTSFLKHKHEIEFAGILFSFTGQSSTGKSTAAALAVSVAG--NPTKGNETLFRSWNATRNALEGYLSNNYG-----------IPIVFDE-------------------LSSTTLRDTTGLLYSIAEGQGRQRSNVHGEVKTPKNWGTSVISTSEYSIFNDSAQNDGLRVR----TIEINE-------------------QFTTNATNA------DNIKKAVALNYGHVLPLVAKYLINR--------------------------EDEVIQWFYKEVDWFEAKLKDE-----------------------------TNNTGIRMFKRYAVITTSAKILGRVLSTD-------IDIANIRDYFIDYHTHTVSERSLADKAIDVIIQFVAQNRGKFSDEGALKNMFE---NYGLISLKDDHIEVK---IIANVFKQMLNNHQFQDVNNVVNALRDKGFILADRGRQTT----------------KRS-------VKDNSGKK-----QSLVFYHLK--LDVEFASIL--G----LTKDKSLLQN--------WTPSNDNKAAKELFKSANEG-----IGPSGVHEDF-------------- |
| 1LVK Chain:? ((2-759)) | NPIHDRTSDYHKYLKVKQGDSDLFKLTVSD-KRYIWYNPDPKERDS------------YECGEIVSETSD--SFTFKTSDGQDRQVKKDDANQRNPIKF--DGVEDMSELSYLNEPAVFHNLRVRYN----------QDLIYTYSGLFLVAVNPFKRIPIYT------------------------QEMVDIFKGRRRNEVAPHIFAISDVAYRSMLDDRQ----NQSLLITGESGAGKTENTKKVIQYLASVAGRNQAGVLEQQILQANPILEAFGNAKTTRNNNSSRFGKFIEIQFNNAGFISGASIQSYLLEKSRVVFQSTSERNYHIFYQLLAG-ATAEEKKALHLAGPESFN-YLNQSGCVDIKGVSDEDEFKITRQAMDIVGFSQEEQMSIFKIIAGILHLGNIKFEKGAGEGAVLKDKTALNAASTV-FGVNPSVLEKALMEPRILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVLCSERKAYFIGVLDISGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKVEQEKYLKEKINLDSQATIDLIDGRQPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEEPRFSKTEFGVTHYAGQVMYEIQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIA------SRAFLTVAAQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVLEGIRITRKGFPNRIIYADFVKRYYDLAPNVPRDAEDSQKATDAVLKHLNIDPEQFRFGITKI---FFRAGQLARIEEARE |
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General information:
TITO was launched using:
| RESULT:
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Template: 1LVK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -52963 for 3439 contacts (-15.4/contact) +
2D Compatibility (PS) -55757 + (NN) -20138 + (LL) 3896
1D Compatibility (HY) -15600 + (ID) 4100
Total energy: -144662.0 ( -42.07 by residue)
QMean score : 0.246
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