Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | QDTFIAAVYEHAAILPNATLTPVSREEALALMNRNLDILEGAITSAADQGAHIIVTPEDAIYGWNFNRDSLYPYLEDIPDPEVNWIPCNNRNRFGQTPVQERLSCLAKNNSIYVVANIGDKKPCDTSDPQCPPDGRYQYNTDVVFDSQGKLVARYHKQNLFM--GENQFNVPKEPEIV--TFNTTFGSFGIFTCFDILFHDPAVTLVKDFHVDTIVFPTAWMNVLP-HLSAVEFHSAWAMGMRVNFLASNIHYPS--KK-MTGSGIYAPNSSRAFHYDMKTEEGKLLLSQLDSHPSHSAVVNWTSYASSIEALSSGNKEFKGTVFFDEFTFVKLTGVAGNYTVCQKDLCCHLSYKMSENIPNEVYALGAFDGLHTVEGRYYLQICTLLKCKTTNLNTCGDSAETASTRFEMFSLSGTFGTQYVFPEVLLSENQLAPGEFQVSTDGRLFSLKPTSGPVLTVTLFGRLYEKDWASNASSG |
| 3P8K Chain:A ((35-259)) | -------------------------------SSKNETQITQWFEKNMNAEVDVVVLPEMWNNGYDLE--HLN----EKAD-------------NNLGQSFSFIKHLAEKYKVDIVAGSVSNI----------RNNQ-IFNTAFSVNKSGQLINEYDKVHLVPMLREHEFLTAGE-YVAEPFQLSDGTYVTQLICYDLRFPELLRYPA-RSGAKIAFYVAQWPMSRLQHWH--SLLKARAIENNMFVIGTNSTGFDGNTEYAGHSIVINPNGDLVGELN--ES-ADILTVDLNL----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3P8K.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -104583 for 1779 contacts (-58.8/contact) +
2D Compatibility (PS) -22804 + (NN) -8619 + (LL) 14308
1D Compatibility (HY) -3200 + (ID) 1700
Total energy: -126598.0 ( -71.16 by residue)
QMean score : 0.154
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