Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -------------------MIFLAILDLKSLVLNAINYWGPKNNNGIQGGDFGYPISEKQIDTSIITSTHPRLIPH--------DLTIPQNLETIFTTTQVLTNNT--DLQQSQTVSFAKKTTTTTSTSTTNGWTEGGKISDT----LEEKVSVSIPFIGEGGGKNSTTIE----ANFAHNSSTTTFQQASTDIEWNISQPVLVPPRKQVVATLVIMGGNFTIPMDLMTTIDSTEHYSGYP-----------------ILTWISSPDNSYNGPFMSWY----------FANWPNLPSGFGPLNSDNTVTYTGSVVSQVSAGVYATVRFDQYDIHNLRTIEKTWYAR-HATLHNGKKISINNVTEMAPTSPIKTN |
| 1PRE Chain:A ((85-470)) | IPTLSALDIPDGDEVDVQWRLVHDSANFIKPTSYLAHYLGYAWVGGNHSQYVGEDMDVTRDGDGWVIRGNNDGGCDGYRCGDKTAIKVSNFAYNLDPDSFKHGDVTQSDRQLVKTVVGWAVNDPQSGYDVTLRYDTATNWSKTNTYGLSEKVTTKNKFKWPLVGETELSIEIAANQSWASQNGGSTTTSLSQSVRPT------VPARSKIPVKIELYKADISYPYEFKADVSYDLTLSGFLRWGGNAWYTHPDNRPNWNHTFVIGPYKDKASSIRYQWDKRYIPGEVKWWDWNWTIQQNGLSTMQNNLARVLRPVRAGITGDFSAESQFAGNIEIGAPVPLGLRLEIPLDAQELSGLGFNNVSLSVTPAANQ-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1PRE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 8086 for 2139 contacts (3.8/contact) +
2D Compatibility (PS) -32568 + (NN) -9886 + (LL) 496
1D Compatibility (HY) -400 + (ID) 2000
Total energy: -36272.0 ( -16.96 by residue)
QMean score : 0.191
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