Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ------MDSLVKIMGSFLALSLIMIFSSCIVNEHVD--EGNI----KENAVRMMECIVNKDSEKLFDFYNKDMKDNYKDSSLDEIRQLFEYIDGAITSYNYEG-------KGGGQEAKN-DGIICYYSCHPE----FDFTTETGQEYTISFSYHYIWNEHP-EYEGINMIQICKDGNWGE--KLIIGRNY-YKE------------------------- |
| 1FD9 Chain:A ((9-212)) | TDKDKLSYSIGADLGKNFKNQGIDVNPEAMAKGMQDAMSGAQLALTEQQMKDVLNKFQKDLMAKRTAEFNKKADENKV--KGEAFLTENKNKPGVVVL--PSGLQYKVINSGNGVKPGKSDTVTVEYTGRLIDGTVFDSTEKTGKPATFQVS-----QVIPGWTEALQLMPA------GSTWEIYVPSGLAYGPRSVGGPIGPNETLIFKIHLISVKKS |
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General information:
TITO was launched using:
| RESULT:
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Template: 1FD9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -877 for 759 contacts (-1.2/contact) +
2D Compatibility (PS) -15856 + (NN) -2948 + (LL) 444
1D Compatibility (HY) 2800 + (ID) 1300
Total energy: -17737.0 ( -23.37 by residue)
QMean score : 0.135
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