Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSEAALTPAFEEPEAPRASPRSRSTLLKRLADVVCLPSSRINAFERSMTADLLVEMLRDANVGEREKVARRLAMLNEMPGVLVRLLLRDELPVARALLVDSEKLSDADLISCLYQATTEHRRLIAQRRGVSEVVADALIEVGEPAVIETLLRNELVKLSHQGVENIVAATRDAQHLIPLLLRRAELRPSHAYVMFWWADSEARRVILQRFAVSREILQDAVGDVFALASAEGWQDPLSRKALQFIERRQRNRAAIAKSPFNSLDEAVAAGEGGFNREIAEEISYLSGLKPMTGAKIFTDP---GG-EPLAILCKATGLPRGCVRQLWRGLRRQEVDRTGATDPNLER-VLTVYDAIAVDRAQTVLRYWNWSLTSALTPALLKAIRDGDEAAVDEYSAPQRAAMLALSRDFGR |
1B0N Chain:A ((18-106)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SELAEKAGVAKSYLSSIERNLQTNPSIQFLEKVSAVLDVSVHTL---LD---EKHET---LDSEWEKLVRDAMTSGVSKKQFREFLDYQKWRK---------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1B0N.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -14434 for 379 contacts (-38.1/contact) +
2D Compatibility (PS) -8257 + (NN) -3123 + (LL) 27700
1D Compatibility (HY) 400 + (ID) 350
Total energy: 1936.0 ( 5.11 by residue)
QMean score : 0.058
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