Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MASWSHPQFEKGADDDDKSEPPVSMLMQVAGAVETSKGGEKWAPVTRNKFLFVGTQVRTGADGGGKLIDQNSGMAQTIGANSVVEITAAGPKAVSGSLSAPEAASGDLVAGLSNRFAEAQRYTTVRRSVKKEAADLKLRVASDITLSPTYPDLVWENMGAQYGYTLVIDGTSHAVPATSGEMVRFRVPSLTPGAHSFGVTVTEGGQAVGQTEKGGTIVWLSATEDKALVDGVARV--KAASTGDEFALGNYLDS---KGVTVAAMDAYRKHFASHKD-DNDMRPLLIKTYNDLKLRDLRQKEALVYNEQLEGNPGFSSISAHHHHHHHHHH |
| 1Y8M Chain:A ((15-113)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EPLYPQQLEILRQQVVSEGGPTATIQSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQV--------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1Y8M.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -4912 for 610 contacts (-8.1/contact) +
2D Compatibility (PS) -9702 + (NN) -3268 + (LL) 11768
1D Compatibility (HY) -2000 + (ID) 500
Total energy: -8614.0 ( -14.12 by residue)
QMean score : 0.122
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